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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015930320.1_cds_XP_016477379.1_69117
CDS Infomation

[gene=LOC107798862] [db_xref=GeneID:107798862] [protein=protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X2] [protein_id=XP_016477379.1] [location=complement(join(21556..21693,21779..21898,22110..22253,23564..23615,24860..24932,25709..25916,26021..26066,26178..26263,26564..26617))] [gbkey=CDS]
Sequence

ATGGATGACTCCATGGAAACAGAAGAAGAATTGGCCGAGTTCACATTAGCTGAGGCTATG
AAAATGACGACCTTGTTTAAGCGAATGAAAGAAAAACCAATTAGTCAAGAGTTCTGTCAA
AAACTTGCAACAAAGTTTAGTTGTTCACCTTATCGTACTGGAAAATCTTTCATAAAATGG
GAACAGGTGCAAACTTGGTTTACGGATGAGCAAAAAACACAAGCATCTAAAGCGATTGTT
GTTAAGAAAGAATCTGATGTTCCTCGACCTCGACAAGCAAAAAAACCAAAATCTAAAAAG
AAATTTTCAGCTCTAATGCTTTCCAGAAAATACAATACTTGCGGGTACACAAGACTCCCC
GAATGTGCATATGACCGGCCTCAGAAGCCCAGAGTTTCTGCAGCAGAGATGGCCACAGAG
CTCGCAGAGTTGTCTTTTGAAGCTCTTTCAGCAAAGGATTTAGCTTGGTATGATGTGGCC
TCATTTCTCAACTTCAGAGTTCTTCGCACAGGCGAGCTTGAAGTTCGTGTAAGATTTGCT
GGCTTTGGTCATGAAGAAGATGAATGGGTGAATGTTAAGAGGAGAGTACGTGAACGTTCC
GTTCCTTTAAAGCCCTCAGAATGTGACAGGGTGAATGTTGGAGATCCCTTGATGTGCTTC
AGGGTAGATGAATATCTCGCAGTATATGGTGATGCGCAAGTTGTGGAGATCCAAAGGAAA
TTACACGATAATACAGAATGCACGTGCATCTTTGTCGTTCGCTACGACTTAGATAATGCT
GAGGAGAAAGTTACACTTGACAAGTTATGTTGCAGACCAAACCGAAGCAACAGTATACTG
CCTGAAGGTCATGCTAAATTATGTGTCTTGAACAGTATTGACCAAGCAAATACTCGCTCA
GGGGCGGAGCTAGAGCTTTGA

Peptide Sequence

PEP ID

XP_016477379.1
PEP Infomation

PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X2 [Nicotiana tabacum]
Sequence

MDDSMETEEELAEFTLAEAMKMTTLFKRMKEKPISQEFCQKLATKFSCSPYRTGKSFIKW
EQVQTWFTDEQKTQASKAIVVKKESDVPRPRQAKKPKSKKKFSALMLSRKYNTCGYTRLP
ECAYDRPQKPRVSAAEMATELAELSFEALSAKDLAWYDVASFLNFRVLRTGELEVRVRFA
GFGHEEDEWVNVKRRVRERSVPLKPSECDRVNVGDPLMCFRVDEYLAVYGDAQVVEIQRK
LHDNTECTCIFVVRYDLDNAEEKVTLDKLCCRPNRSNSILPEGHAKLCVLNSIDQANTRS
GAELEL

Transcript Sequence

Gene sequence data has not been registered.